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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26242451_26242830_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26242451 - 26242830

Intron Length:
380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGTGC

5'SS Class:
major

3'SS Sequence:
AATTGTTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAT

U12 Branch Point Sequence:
ATTCTTTCAATT

Flanking Amino Acid:
DYRINLIDTPGHVDFTLEVE

Intron Amino Acid Position:
140

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.5
0.36
1.3
55.9
44.3

Major BPS
77.3
0.68
1
81.5
27

Major PPT
77.1
0.61
0.9
74.3
40.5

Minor 5ss
41.6
-0.9
3.4
59.3
45.4

Minor BPS
59.4
0.37
1.5
75.55
35.2

Associated Gene:

Gene:
GFM2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26238502 - 26259269
20768