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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26246110_26249258_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26246110 - 26249258

Intron Length:
3149

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAAGTTC

5'SS Class:
major

3'SS Sequence:
TATTCTGTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGTAAA

U12 Branch Point Sequence:
TAAAACAGAACT

Flanking Amino Acid:
QDARNTLIEQVADLDDEFAE

Intron Amino Acid Position:
282

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1
70
35.2

Major BPS
67.4
0.43
1.1
67.9
36.3

Major PPT
71.1
0.47
1.1
71.7
38.1

Minor 5ss
42.4
-0.8
3.4
58.5
40.8

Minor BPS
46.6
-0.1
1.9
66.88
42.3

Associated Gene:

Gene:
GFM2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26238502 - 26259269
20768