Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26255581_26256084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26255581 - 26256084

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TACCTCTTAACT

Flanking Amino Acid:

KVKLDPDTGQTILCGMGELH

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

75.4

0.57

0.9

70.4

39.9

Minor 5ss

-1.2

3.1

47.6

42.4

Minor BPS

74.7

0.85

1.2

82.35

38.7

Associated Gene:

Gene:

GFM2

Ensembl Gene ID:

ENSAPLG00000007221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007543

26238502 - 26259269

20768