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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26258619_26259140_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26258619 - 26259140

Intron Length:
522

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTATGTGGT

5'SS Class:
major

3'SS Sequence:
CTGTTTTGTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTAAA

U12 Branch Point Sequence:
TTTCCTAAACTA

Flanking Amino Acid:
VAAVPLAEMMGYSTVLRSLT

Intron Amino Acid Position:
736

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
70.6
39.7

Major BPS
72.7
0.57
1
72.1
31.1

Major PPT
80.2
0.68
0.9
76.3
37.7

Minor 5ss
40.6
-1
3.2
55
44.5

Minor BPS
44
-0.4
2
61.11
39.6

Associated Gene:

Gene:
GFM2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26238502 - 26259269
20768