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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26270435_26272706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26270435 - 26272706

Intron Length:

2272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

AAGTGCTTAACT

Flanking Amino Acid:

LPLKSILTNLDAMAFNKFNV

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

82.2

0.72

0.9

76.3

37.8

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

67.8

0.64

1.8

79.65

42.2

Associated Gene:

Gene:

HEXB

Ensembl Gene ID:

ENSAPLG00000007852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027292

26260425 - 26276809

16385

ENSAPLT00000008208

26260382 - 26276809

16428