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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26276198_26276282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26276198 - 26276282

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

GCCGCCTGAGGG

Flanking Amino Acid:

GCGILQDAFRRYYEYIFGQS

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

63.6

42.3

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

74.8

0.56

0.9

68.9

37.1

Minor 5ss

32.1

-2

3.2

44.8

Minor BPS

39.4

-0.9

36.32

45.3

Associated Gene:

Gene:

HEXB

Ensembl Gene ID:

ENSAPLG00000007852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027292

26260425 - 26276809

16385

ENSAPLT00000008208

26260382 - 26276809

16428