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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26469443_26471633_F

Intron Information:

Intron Rank:
143230
Intron Class:
major
Intron Phase:
Intron Coordinates:
26469443 - 26471633
Intron Length:
2191

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAGGAATC
5'SS Class:
strong_major
3'SS Sequence:
TATTTTGTTCTAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTAGAT
U12 Branch Point Sequence:
TTTTTTTCCACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.7
0.79
1
79
35.3
Major BPS
79.2
0.72
1
75
40
Major PPT
80.8
0.69
0.9
73.8
41.4
Minor 5ss
36.6
-1.5
3.3
51.4
45.5
Minor BPS
58.1
0.34
2
83.3
38.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000027166
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044082
26469020 - 26473146
4127