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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26686333_26687751_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26686333 - 26687751

Intron Length:

1419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTGGGGATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGGAT

U12 Branch Point Sequence:

TTTTTCTCGTCT

Flanking Amino Acid:

RMTSSRNKCKTKNKDTKDKE

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

76.9

34.6

Major BPS

46.5

-0.2

1.6

42.8

49.4

Major PPT

49.1

-0

1.2

45.2

45.3

Minor 5ss

39.6

-1.2

2.8

50.5

45.7

Minor BPS

45.4

-0.2

3.6

82.88

38.6

Associated Gene:

Gene:

ARHGEF28

Ensembl Gene ID:

ENSAPLG00000008283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040038

26644124 - 26739888

95765

ENSAPLT00000019003

26644124 - 26703195

59072

ENSAPLT00000008616

26644124 - 26739888

95765

ENSAPLT00000040940

26644124 - 26717491

73368