Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26688153_26690820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26688153 - 26690820

Intron Length:

2668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

TGTTGGTTACCT

Flanking Amino Acid:

QDFTVGDSNEERAYSLPEHS

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

0.27

1.3

53.3

44.2

Major PPT

0.74

0.9

77.3

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

47.6

-0.1

2.6

76.24

46.3

Associated Gene:

Gene:

ARHGEF28

Ensembl Gene ID:

ENSAPLG00000008283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008616

26644124 - 26739888

95765