Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26781682_26782341_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26781682 - 26782341

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGATTT

5'SS Class:

major

3'SS Sequence:

GTGGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AATTATGCAACT

Flanking Amino Acid:

SKLNGDVFITGSYDHTVKVF

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

75.4

34.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.6

0.51

65.2

45.5

Minor 5ss

46.3

-0.4

2.8

65.6

45.6

Minor BPS

45.8

-0.2

2.3

68.94

41.7

Associated Gene:

Gene:

UTP15

Ensembl Gene ID:

ENSAPLG00000008503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008871

26775302 - 26784364

9063