Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26845332_26846313_R

Intron Information:

Intron Rank:

130107

Intron Class:

major

Intron Phase:

Intron Coordinates:

26845332 - 26846313

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTTTT

5'SS Class:

major

3'SS Sequence:

CCTTCTGTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

CCTTCTGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

75.2

37.4

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

73.2

0.52

0.9

68.6

Minor 5ss

39.8

-1.1

3.3

57.9

46.7

Minor BPS

0.28

2.1

70.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044485

26839361 - 26846757

7397

ENSAPLT00000035784

26843843 - 26846757

2915