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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27021824_27026391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27021824 - 27026391

Intron Length:

4568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATATGTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

CTTTTATAAATT

Flanking Amino Acid:

SLSAANTPTVGVSRGPSPVS

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

78.6

0.71

78.6

Major PPT

69.1

0.43

45.2

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

54.6

0.22

1.9

76.06

41.3

Associated Gene:

Gene:

FCHO2

Ensembl Gene ID:

ENSAPLG00000009230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033804

27009900 - 27098730

88831

ENSAPLT00000009628

27011379 - 27098730

87352