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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27047552_27051384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27047552 - 27051384

Intron Length:

3833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

IMKKEKDTESVECPDADSVN

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

FCHO2

Ensembl Gene ID:

ENSAPLG00000009230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033804

27009900 - 27098730

88831

ENSAPLT00000009628

27011379 - 27098730

87352