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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27053300_27074979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27053300 - 27074979

Intron Length:

21680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTATCTTCATT

Flanking Amino Acid:

ESKGTGKERPGPIEFEECNT

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.2

0.57

79.5

32.7

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

64.3

0.53

1.8

83.96

37.3

Associated Gene:

Gene:

FCHO2

Ensembl Gene ID:

ENSAPLG00000009230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033804

27009900 - 27098730

88831

ENSAPLT00000009628

27011379 - 27098730

87352