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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27075077_27076456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27075077 - 27076456

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTTGAAG

Flanking Amino Acid:

IKEIHLQIGEVHEEFINNMT

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.5

0.69

82.9

32.5

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

58.5

0.12

1.5

63.56

38.5

Associated Gene:

Gene:

FCHO2

Ensembl Gene ID:

ENSAPLG00000009230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033804

27009900 - 27098730

88831

ENSAPLT00000009628

27011379 - 27098730

87352