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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27076556_27081465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27076556 - 27081465

Intron Length:

4910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CATTGGTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATGA

Flanking Amino Acid:

FEQKMTETAQKFQDIEETHL

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

100

1.24

0.5

100

Major PPT

66.3

0.37

1.1

60.4

44.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

56.4

0.2

2.1

76.51

40.6

Associated Gene:

Gene:

FCHO2

Ensembl Gene ID:

ENSAPLG00000009230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033804

27009900 - 27098730

88831

ENSAPLT00000009628

27011379 - 27098730

87352