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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27123687_27124513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27123687 - 27124513

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTTGTTTAAAA

Flanking Amino Acid:

ACFQHVKPCIADFMPILGTN

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.3

35.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

84.2

0.77

0.8

77.7

36.7

Minor 5ss

54.7

0.16

2.3

70.5

40.1

Minor BPS

62.4

0.39

1.8

74.83

36.6

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218