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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27126010_27127479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27126010 - 27127479

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TCATCCTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATCCTGAACA

Flanking Amino Acid:

DSVGHHLNKPEYIQMLMPPL

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

77.2

32.8

Major BPS

100

1.24

0.5

100

Major PPT

0.36

61.8

38.5

Minor 5ss

36.1

-1.6

2.9

47.9

41.8

Minor BPS

73.5

0.73

1.4

77.45

39.1

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218