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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27130346_27131365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27130346 - 27131365

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

GILVLGAIAEGCMQGMIQYL

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.9

0.96

0.7

88.5

28.1

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218