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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27136319_27142769_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27136319 - 27142769

Intron Length:

6451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTATGGTGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ATACAAGTAATT

Flanking Amino Acid:

LLPHMISIVEYMLLRTQDHD

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

55.6

0.13

1.2

55.8

43.5

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

-0.4

2.2

63.34

40.4

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218