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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27142893_27143577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27142893 - 27143577

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TAATTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAGACTTTAACT

Flanking Amino Acid:

LMMHIDSFIENLFALATDEE

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

71.9

0.49

67.1

38.7

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

69.6

0.69

1.3

76.44

39.9

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218