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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27168284_27171724_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

27168284 - 27171724

Intron Length:

3441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

TCTTTCTCTTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTTCCTTAACA

Flanking Amino Acid:

DTTTQRAVQQKLEQLNQYPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.2

43.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

90.4

0.91

0.6

88.8

20.5

Minor 5ss

87.7

1.27

1.1

81.3

32.5

Minor BPS

97.3

1.48

0.5

99.7

14.8

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218