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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27171840_27172120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

27171840 - 27172120

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGTC

5'SS Class:

major

3'SS Sequence:

GGTGTGTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GCGCCGTTGTCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

74.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

68.6

0.42

61.1

44.6

Minor 5ss

31.3

-2.1

3.4

43.4

44.3

Minor BPS

32.2

-1.5

3.6

40.21

44.1

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218