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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27172282_27176125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

27172282 - 27176125

Intron Length:

3844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGGCGA

5'SS Class:

major

3'SS Sequence:

TTGTCGCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GAGGCGCTGACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.4

51.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.38

1.1

62.4

39.7

Minor 5ss

31.1

-2.2

3.3

33.9

41.9

Minor BPS

-1

2.3

40.69

43.5

Associated Gene:

Gene:

TNPO1

Ensembl Gene ID:

ENSAPLG00000009619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010077

27115147 - 27176364

61218