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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27235127_27235210_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27235127 - 27235210

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAAATCT

5'SS Class:

major

3'SS Sequence:

TGGGCTGGTTTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

GAATGCTGAATG

Flanking Amino Acid:

AACRDGDRGRSSSSIKSQDR

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

73.6

30.9

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

57.5

0.17

1.1

54.3

45.8

Minor 5ss

34.5

-1.8

3.2

48.3

47.4

Minor BPS

47.8

-0.3

1.9

51.44

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038271

27233958 - 27237726

3769