Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27392602_27396042_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27392602 - 27396042

Intron Length:

3441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TGTGATTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATGCTAACA

Flanking Amino Acid:

PGDIKICKEAVDVLETILQS

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.5

0.51

1.1

69.4

45.7

Minor 5ss

-1.1

42.1

Minor BPS

49.2

-0

2.3

72.43

39.4

Associated Gene:

Gene:

MRPS27

Ensembl Gene ID:

ENSAPLG00000010577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011058

27356178 - 27399754

43577