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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27416740_27418797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27416740 - 27418797

Intron Length:

2058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGTTGTTTGATT

Flanking Amino Acid:

ASKSAKTATTGPGTTKSAKS

Intron Amino Acid Position:

2455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

66.4

0.37

1.1

67.2

38.2

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

61.3

0.44

1.8

79.17

37.6

Associated Gene:

Gene:

MAP1B

Ensembl Gene ID:

ENSAPLG00000030918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032100

27413967 - 27482545

68579