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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27425426_27430294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27425426 - 27430294

Intron Length:

4869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTTCG

5'SS Class:

strong_major

3'SS Sequence:

TTCACAACCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTTTCACAACC

Flanking Amino Acid:

NFIEIFTDQEIGELLSTTHP

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.2

36.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

61.5

0.26

0.9

52.4

36.8

Minor 5ss

41.2

-1

2.6

49.9

46.5

Minor BPS

0.2

1.8

72.44

38.1

Associated Gene:

Gene:

MAP1B

Ensembl Gene ID:

ENSAPLG00000030918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032100

27413967 - 27482545

68579