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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27430436_27434298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27430436 - 27434298

Intron Length:

3863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCCGTCACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

CTCTCCGTCACT

Flanking Amino Acid:

NPSDEAVSTEVRLMITDAAR

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

68.9

0.43

0.9

62.8

33.1

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

50.5

0.1

2.4

75.03

47.8

Associated Gene:

Gene:

MAP1B

Ensembl Gene ID:

ENSAPLG00000030918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032100

27413967 - 27482545

68579