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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27434382_27477336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27434382 - 27477336

Intron Length:

42955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

HSARFSPDVRGQKILHHRSD

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.65

0.9

75.9

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

MAP1B

Ensembl Gene ID:

ENSAPLG00000030918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032100

27413967 - 27482545

68579