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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27615251_27635047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27615251 - 27635047

Intron Length:

19797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TCTTCTCTATGT

Flanking Amino Acid:

PVDGTVTKRQAVLSPLIAIA

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

87.2

0.84

0.6

22.6

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

47.9

-0

2.2

71.91

45.3

Associated Gene:

Gene:

PGM5

Ensembl Gene ID:

ENSAPLG00000011043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041634

27615161 - 27697735

82575