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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27629510_27635047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27629510 - 27635047

Intron Length:

5538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TGCCACTTATTC

Flanking Amino Acid:

PVDGTVTKRQGLRIIFSDAS

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

71.3

0.53

61.3

Major PPT

77.6

0.62

0.7

25.4

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

48.4

-0.1

1.8

57.6

41.1

Associated Gene:

Gene:

PGM5

Ensembl Gene ID:

ENSAPLG00000011043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038652

27584288 - 27697735

113448

ENSAPLT00000011529

27614361 - 27697735

83375

ENSAPLT00000046853

27614091 - 27697735

83645

ENSAPLT00000044866

27607066 - 27697735

90670