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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27636276_27647829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27636276 - 27647829

Intron Length:

11554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TATCTCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGTGCTTTACAT

Flanking Amino Acid:

SLCGEESFGTGSDHLREKDG

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.6

0.58

0.8

74.2

30.5

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

54.1

0.21

1.8

73.53

43.4

Associated Gene:

Gene:

PGM5

Ensembl Gene ID:

ENSAPLG00000011043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044866

27607066 - 27697735

90670

ENSAPLT00000041634

27615161 - 27697735

82575

ENSAPLT00000038652

27584288 - 27697735

113448

ENSAPLT00000011529

27614361 - 27697735

83375

ENSAPLT00000046853

27614091 - 27697735

83645