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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27647946_27680478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27647946 - 27680478

Intron Length:

32533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTGTCTTAATT

Flanking Amino Acid:

RSMPTSTALDKVAKVMKVPV

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

70.6

35.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.8

0.63

0.8

72.8

32.2

Minor 5ss

-1.9

3.1

39.6

Minor BPS

68.8

0.67

1.4

77.24

40.1

Associated Gene:

Gene:

PGM5

Ensembl Gene ID:

ENSAPLG00000011043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038652

27584288 - 27697735

113448

ENSAPLT00000011529

27614361 - 27697735

83375

ENSAPLT00000046853

27614091 - 27697735

83645

ENSAPLT00000044866

27607066 - 27697735

90670

ENSAPLT00000041634

27615161 - 27697735

82575