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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27681732_27684154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27681732 - 27684154

Intron Length:

2423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCTGTTTTTACA

Flanking Amino Acid:

IKIRIDAMNGVMGPYVRRIL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.5

0.87

0.7

83.2

31.9

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

54.2

0.12

1.7

65.78

41.1

Associated Gene:

Gene:

PGM5

Ensembl Gene ID:

ENSAPLG00000011043

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038652

27584288 - 27697735

113448

ENSAPLT00000011529

27614361 - 27697735

83375

ENSAPLT00000046853

27614091 - 27697735

83645

ENSAPLT00000044866

27607066 - 27697735

90670

ENSAPLT00000041634

27615161 - 27697735

82575