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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27714226_27718741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27714226 - 27718741

Intron Length:

4516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATACCCTAACA

Flanking Amino Acid:

GHAMDVIRLKGLVSIQGKSH

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.9

42.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

69.4

0.44

1.1

76.8

36.4

Minor 5ss

34.2

-1.8

2.8

41.7

44.8

Minor BPS

67.9

0.56

1.7

78.81

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042483

27713335 - 27742252

28918

ENSAPLT00000012737

27713335 - 27742252

28918