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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27732092_27734527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27732092 - 27734527

Intron Length:

2436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ACATCCTTAATC

Flanking Amino Acid:

SVVDAKHGLQHLTEEKPDGL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

73.3

0.52

66.3

44.6

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

76.2

0.8

1.1

73.62

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012737

27713335 - 27742252

28918