Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27735638_27738662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27735638 - 27738662

Intron Length:

3025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTCGC

5'SS Class:

major

3'SS Sequence:

CTGTATTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATGTTAATT

Flanking Amino Acid:

LLETTGLADPGAVASMFWVD

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

59.9

45.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.5

0.55

0.9

73.1

Minor 5ss

33.2

-1.9

3.1

44.8

Minor BPS

56.4

0.28

2.1

76.97

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042483

27713335 - 27742252

28918

ENSAPLT00000012737

27713335 - 27742252

28918