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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27751660_27768471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27751660 - 27768471

Intron Length:

16812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTAATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CTCTGCTTAATT

Flanking Amino Acid:

ERRAFALKINRYSSAEIRKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

71.2

34.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

65.3

0.35

1.1

64.5

39.7

Minor 5ss

24.3

-3

3.1

28.4

43.8

Minor BPS

66.3

0.59

1.8

79.08

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040035

27751607 - 27768658

17052