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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27775842_27780775_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27775842 - 27780775

Intron Length:

4934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTAC

5'SS Class:

major

3'SS Sequence:

GACATCCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACATCCTGAAAG

Flanking Amino Acid:

YIRDWLIVNRKNQGNSDTCN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

72.1

34.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

49.5

-0

1.2

48.3

39.3

Minor 5ss

45.9

-0.4

2.8

59.1

Minor BPS

55.3

0.03

1.7

57.33

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040020

27772779 - 27788408

15630