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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27780900_27781442_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27780900 - 27781442

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

CATTTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TGTGCCTTCATT

Flanking Amino Acid:

TLDSGEATFQTGPRHVPTLP

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

0.62

1.1

77.2

Major PPT

0.56

0.9

70.4

34.7

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

0.49

1.9

80.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040020

27772779 - 27788408

15630