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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27781656_27782178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27781656 - 27782178

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTAATGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AACTGTTTAATG

Flanking Amino Acid:

LLALYPSVDEEDAVEIRPVP

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

39.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.38

1.1

63.1

42.1

Minor 5ss

38.7

-1.3

2.9

47.6

Minor BPS

51.5

-0

1.8

54.18

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040020

27772779 - 27788408

15630