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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27782265_27782887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27782265 - 27782887

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTTCCTTAACA

Flanking Amino Acid:

NRILVKLQSLKFDIEIEPLF

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

81.1

0.7

0.8

77.1

30.2

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

90.4

1.26

0.9

91.36

30.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040020

27772779 - 27788408

15630