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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27785885_27786116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27785885 - 27786116

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAGAG

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GAATACTGATTT

Flanking Amino Acid:

SLTLSTFFKQEGDRLSDEDL

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

59.5

39.7

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

82.3

0.73

0.7

77.8

24.1

Minor 5ss

28.1

-2.5

3.5

37.6

47.2

Minor BPS

46.3

-0.2

1.8

61.36

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040020

27772779 - 27788408

15630