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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27799368_27800041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27799368 - 27800041

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTAAACA

Flanking Amino Acid:

EIYTAITYHNKSPDFYEEVK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

74.3

39.2

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

65.2

0.47

1.6

75.26

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279