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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27803949_27804877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27803949 - 27804877

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTACT

5'SS Class:

major

3'SS Sequence:

TTTTGCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TTTTGCTTCACA

Flanking Amino Acid:

VQPMVIAGQTANFSQFAFES

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

34.3

Major BPS

0.47

1.2

69.9

35.3

Major PPT

85.2

0.79

0.8

32.1

Minor 5ss

44.5

-0.6

2.5

61.4

42.8

Minor BPS

65.3

0.48

2.2

83.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023740

27800660 - 27817917

17258

ENSAPLT00000013317

27797609 - 27844887

47279