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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27806946_27808805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27806946 - 27808805

Intron Length:

1860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCATTCTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTATGTATAT

Flanking Amino Acid:

EEVKSIMSSKPVDHSSSRMS

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

84.7

0.86

74.3

40.7

Major PPT

79.8

0.67

0.8

31.5

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

43.4

-0.4

2.3

67.25

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023740

27800660 - 27817917

17258

ENSAPLT00000013317

27797609 - 27844887

47279