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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27808902_27810218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27808902 - 27810218

Intron Length:

1317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTAC

5'SS Class:

major

3'SS Sequence:

GTTTATTATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TGTTTATTATCT

Flanking Amino Acid:

CANPRPSNKKHFHEELALQM

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.3

38.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

74.2

0.55

66.8

43.9

Minor 5ss

42.7

-0.8

3.2

57.8

47.2

Minor BPS

60.7

0.41

1.9

81.71

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279

ENSAPLT00000023740

27800660 - 27817917

17258