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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27810315_27811556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27810315 - 27811556

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAC

U12 Branch Point Sequence:

TCCATTATACCT

Flanking Amino Acid:

KYAWFFFELLIKSMAQYVHN

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.5

29.4

Major BPS

60.5

0.26

58.8

37.7

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

39.8

-1.1

3.2

53.2

Minor BPS

44.8

-0.3

1.8

60.22

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023740

27800660 - 27817917

17258

ENSAPLT00000013317

27797609 - 27844887

47279