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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27811707_27814181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27811707 - 27814181

Intron Length:

2475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

ATTTTTTTAAAG

Flanking Amino Acid:

IAALLVKPQKESEQAEKINI

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

0.7

82.5

32.7

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

68.2

0.43

1.4

70.46

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023740

27800660 - 27817917

17258

ENSAPLT00000013317

27797609 - 27844887

47279